10/6/2008
 
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Pilot Projects Index
2002 Award Recipients
 
In 2002, seven Pilot Projects were funded, for a total of $127,000.
 
Indoor endotoxin, allergens, and asthma severity in Los Angeles
Investigator(s): Rob McConnell, M.D., Associate Professor, Department of Preventive Medicine, USC
Description: The role of endotoxin in asthma is not well understood, and there has been little study of the effect of relatively low indoor levels of exposure on asthmatics. However, inflammation is a cardinal feature of asthma exacerbation. In this pilot study, we will build on an existing resource, the LA CASA asthma intervention study, in which health outcomes and child’s bedding dust cockroach and house dust allergen levels are measured repeatedly in the homes of asthmatic children in Los Angeles.
Correlation of air pollution associated deficits in lung function growth associated with small airways structure assessed by high res CT
Investigator(s): Frank Gilliland, M.D., Ph.D., Department of Preventive Medicine, USC
Description: Lung function growth is frequently quantified using spirometry in environmental epidemiologic studies of air pollution. Many studies have focused on the effects of acute exporsure on short-term changes in airway function; however, few have investigated the long-term effects of chronic exposure on childhood lung function. Findings from the Children’s Health Study, a 10-year longitudinal study of the chronic effects of air pollution among 6000 children residing in 12 southern California communities indicate that current levels of particulate matter, nitrogen dioxide, and vapor acids are associated with reduced lung function growth and lower maximum attained measures of airway flows. The deficits (up to 8%) are largest and most consistent for FEV1 and MMEF, suggesting that flows from small airways may be reduced. The biology underlying these spirometric deficits has yet to be determined. Recent developments in lung imaging using High-Resolution CT (HRCT) now make it feasible to non-invasively study the structure small airways as small as 2mm in diameter. These developments make it possible to investigate the anatomic relationship between air pollution associated deficits in spirometric measure of airway flow and permanent changes the structures of small airway.
Examination of DNA methylation patterns in human cells subject to oxidative stress
Investigator(s): Joseph G. Hacia,Ph.D., Department of Biochemistry / Molecular Biology, USC
Description: Differential gene expression plays a major role in cellular responses to genotoxic stresses such as exposure to oxidants. DNA methylation is a fundamental cellular mechanism for modulating gene expression. Nevertheless, its role in mediating biochemical responses to genotoxic stresses is not well understood. In this application, the hypothesis that DNA methylation changes play a significant role in cellular responses to oxidative stress will be tested. In order to accomplish this, novel oligonucleotide microarrays to increase the throughput and decrease the costs of fluorescence-based DNA methylation assays will be utilized. A flexible platform will be created that will evaluate the methylation patterns of over 200 genes involved in disease states or responses to cellular stresses. The DNA methylation patterns of fibroblast cell lines subject to controlled levels of oxidative stress will be determined using this technology. These fibroblasts will be obtained with donors from a range of age groups from both genders. We will create a database of DNA methylation patterns in these cell lines. This database will be useful in defining biochemical pathways that are altered by DNA methylation patterns in response to oxidative stress. This will provide the basis for larger-scale studies aimed at studying global DNA methylation responses to identify biomarkers and biochemical response pathways associated with exposure to different environmental stresses or other stimuli.
Off-line sampling of exhaled nitric oxide in respiratory health surveys
Investigator(s): William S. Linn, M.A.; Henry Gong Jr., M.D., Department of Preventive Medicine, USC
Description: Nitric oxide (NO) is an important chemical mediator in a number of organ systems. In the respiratory tract, sources, sinks, and actions of NO are incompletely understood, but empirical studies have shown that the exhaled concentration of NO provides useful information about respiratory disease states. For example, exhaled NO tends to be higher in asthmatics than in healthy individuals, and lower in smokers than in nonsmokers. Accordingly, in the Children's Health Study (CHS) and other large-scale surveys, exhaled NO measurements could help to validate questionnaire data concerning asthma and smoking, and to test hypotheses concerning acute or chronic respiratory effects of air pollution and other measurable risk factors. Ideal "on-line" NO measurement techniques appear too costly for use in large-scale field surveys. "Off-line" measurement should allow more cost-effective use of instrumentation and personnel, but have not been validated in large studies with multiple testing sites requiring long-distance transport of breath samples prior to analysis.
A Comparison of Methods to Measure Cytokines
Investigator(s): Wendy Cozen, D.O., M.P.H., Department of Preventive Medicine, USC
Description: Childhood asthma is increasing worldwide. One of the explanations may be that children are growing up increasingly protected from early childhood infections (the “hygiene hypothesis”) which results in an altered immune system susceptible to asthma and allergy later. Evidence for this is the higher risk of asthma among urban dwelling children and the inverse association with sibship size (fewer siblings, the less exposure to infections when young and the higher the risk of asthma). A possible mechanism for the hygiene hypothesis has been proposed. If measurements using the two methods proposed were correlated it would suggest that we could evaluate the natural history and determinants of Th1/Th2 balance from birth through early childhood using finger sticks as the primary method of blood collection a very feasible approach.
Effects of carcinogen exposure on DNA rearrangements in human cells
Investigator(s): Robert Schiestel, Ph.D., Department of Pathology, USC
Description: Gross genomic instability such as DNA deletions, translocations, amplifications etc. is a hallmark of cancer cells. There is a large body of evidence coming from our as well as other labs that environmental exposure to carcinogens as well as genetic cancer predisposing factors increases the frequency of genetic instability. We propose to develop an assay for genome rearrangements based on the variation of the copy number of DNA repeat. About 20 to 40 copies of a 3.3 kb repeat exists on the ends of both, chromosomes 4 and 10 and changes in the copy number occur by deletion or amplification. We propose to use Pulse Fields Gel Electrophoresis and Flow Cytometry for DNA sizing to determine the effects of several carcinogens, including ionizing radiation, benzo-a-pyrene and benzene on the frequency of such rearrangements. Such a screening assay would be extremely useful to detect environmental as well as genetic predisposing factors for cancer.
A Novel Method for Measurement of Acrolein in Aerosols
Investigator(s): Judith Charles, Ph.D, Department of Environmental Health, UC Davis
Description: As part of the Children’s Health Study (CHS), the Southern California Particle Center and Supersite (SPCS) is also investigating the role of quinines, aldehydes, polyaromatic hydrocarbons (PAHs), and atmospheric transformation products on chronic health effects in children. The SPCS is also investigating whether airway disease and cardiovascular effects will be more severe during periods of high photochemical activity in the summer than in periods of low photochemical activity during the winter. In both projects, there is interest in measuring acrolein and other carbonyls that may adversely affect human health. Acrolein is a component of motor vehicle exhaust, and is also generated by photooxidation of 1,2-butadiene.